STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00612Thioredoxin-related. (173 aa)    
Predicted Functional Partners:
CRD_00613
Cytochrome c biogenesis protein, transmembrane region protein.
 
  
 0.899
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.886
CRD_00029
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.828
CRD_01058
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.828
CRD_01492
Glutaredoxin-like protein region protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 0.816
CRD_00254
Respiratory-chain NADH dehydrogenase domain protein, 51 kDa subunit.
   
   0.804
CRD_01112
Glycosyl transferase, family 39.
    
  0.795
CRD_00853
Heat shock protein Hsp90.
   
 0.783
CRD_01288
Peptidyl-prolyl cis-trans isomerase, cyclophilin type.
  
 
  0.748
CRD_00597
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
 0.726
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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