STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_00861CRISPR-associated protein, Crm2 family. (83 aa)    
Predicted Functional Partners:
CRD_00857
CRISPR-associated RAMP protein, Cmr6 family.
   
 
 0.985
CRD_00862
CRISPR-associated protein, Crm2 family.
      0.910
CRD_00860
Hypothetical protein.
   
   0.903
CRD_00859
CRISPR-associated RAMP protein, Cmr4 family.
   
   0.901
CRD_00858
Hypothetical protein.
       0.785
CRD_00856
Hypothetical protein.
       0.773
CRD_00525
Hypothetical protein.
   
 
 0.588
CRD_00621
Hypothetical protein.
   
 
 0.588
CRD_00529
Hypothetical protein.
   
   0.568
CRD_00530
Hypothetical protein.
   
   0.568
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.