STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_01034Hypothetical protein. (318 aa)    
Predicted Functional Partners:
CRD_02364
Molybdate ABC transporter, permease protein.
  
  
  0.741
CRD_01424
Permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.669
CRD_02954
Inner-membrane translocator; Overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.669
CRD_02199
ABC transporter-like protein.
  
 
 0.664
CRD_00257
Multi-component Transcriptional regulator, Winged helix family.
 
 
 0.619
CRD_01035
Hypothetical protein.
       0.615
CRD_02824
Protein of unknown function DUF1232.
  
     0.611
CRD_00541
Hypothetical protein.
  
     0.599
CRD_02239
Hypothetical protein.
  
     0.575
CRD_00841
Hypothetical protein.
  
     0.559
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.