STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_01060Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family. (327 aa)    
Predicted Functional Partners:
gcvH
Glycine cleavage H-like protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
   
 0.648
CRD_01059
Hypothetical protein.
       0.618
CRD_01061
Conserved hypothetical protein.
       0.588
CRD_02620
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.568
CRD_00960
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.552
CRD_01062
ABC-2.
       0.510
CRD_02625
Conserved hypothetical protein.
  
     0.475
CRD_00492
Conserved hypothetical protein.
  
     0.449
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
   
0.423
CRD_02317
Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.