STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_01112Glycosyl transferase, family 39. (491 aa)    
Predicted Functional Partners:
CRD_00853
Heat shock protein Hsp90.
   
  0.949
CRD_02250
Conserved hypothetical protein.
 
  
  0.940
CRD_00993
Conserved hypothetical protein.
  
  
  0.878
groEL
Chaperonin Cpn60/TCP-1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
  
  0.846
CRD_01988
Heat shock protein DnaJ-like protein.
  
 
  0.832
CRD_01884
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain proteins I and III.
   
 0.829
CRD_00297
Conserved hypothetical protein.
  
 
 0.828
CRD_00397
Thioredoxin reductase.
  
 
  0.820
CRD_00616
Putative uncharacterized protein.
    
  0.818
CRD_01024
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.818
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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