STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_01128Hypothetical protein. (520 aa)    
Predicted Functional Partners:
CRD_01127
Hypothetical protein.
       0.798
CRD_01126
Hypothetical protein.
       0.773
CRD_02752
MscS Mechanosensitive ion channel.
  
     0.729
CRD_01124
Hypothetical protein.
       0.718
CRD_01125
Hypothetical protein.
       0.718
CRD_01123
Hypothetical protein.
 
     0.672
CRD_00702
Hypothetical protein.
 
     0.501
CRD_00075
Hypothetical protein.
 
     0.486
CRD_00700
Hypothetical protein.
 
   
 0.472
CRD_01054
Hypothetical protein.
  
     0.470
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.