STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_01449Putative uncharacterized protein. (210 aa)    
Predicted Functional Partners:
CRD_00257
Multi-component Transcriptional regulator, Winged helix family.
 
   
 0.775
CRD_02542
Conserved hypothetical protein.
  
     0.743
CRD_02898
Conserved hypothetical protein.
  
     0.723
CRD_01450
Arsenical pump membrane protein.
 
   
 0.699
CRD_01179
Conserved hypothetical protein.
  
     0.698
CRD_00222
Conserved hypothetical protein.
  
     0.657
CRD_00797
AmpD.
  
     0.622
CRD_02365
Conserved hypothetical protein.
  
     0.611
CRD_02003
Filament integrity protein.
  
     0.597
CRD_01665
Conserved hypothetical protein.
  
     0.594
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.