Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CRD_00298 | CRD_00586 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.681 |
CRD_00298 | CRD_00637 | Conserved hypothetical protein. | Chaperonin-like protein RbcX. | 0.452 |
CRD_00298 | CRD_01270 | Conserved hypothetical protein. | CAB/ELIP/HLIP superfamily of protein. | 0.718 |
CRD_00298 | CRD_01522 | Conserved hypothetical protein. | S-layer region protein-like protein. | 0.739 |
CRD_00298 | CRD_01577 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.751 |
CRD_00298 | CRD_01696 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.738 |
CRD_00298 | CRD_01993 | Conserved hypothetical protein. | Glutaredoxin 2. | 0.758 |
CRD_00298 | CRD_02531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.765 |
CRD_00298 | CRD_02821 | Conserved hypothetical protein. | Protein thf1. | 0.749 |
CRD_00298 | CRD_02841 | Conserved hypothetical protein. | Protein of unknown function DUF477. | 0.769 |
CRD_00586 | CRD_00298 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.681 |
CRD_00586 | CRD_00637 | Conserved hypothetical protein. | Chaperonin-like protein RbcX. | 0.701 |
CRD_00586 | CRD_01522 | Conserved hypothetical protein. | S-layer region protein-like protein. | 0.643 |
CRD_00586 | CRD_01577 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.563 |
CRD_00586 | CRD_01696 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.739 |
CRD_00586 | CRD_01993 | Conserved hypothetical protein. | Glutaredoxin 2. | 0.463 |
CRD_00586 | CRD_02531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.472 |
CRD_00586 | CRD_02841 | Conserved hypothetical protein. | Protein of unknown function DUF477. | 0.523 |
CRD_00637 | CRD_00298 | Chaperonin-like protein RbcX. | Conserved hypothetical protein. | 0.452 |
CRD_00637 | CRD_00586 | Chaperonin-like protein RbcX. | Conserved hypothetical protein. | 0.701 |
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