STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02068Phosphonate ABC transporter, ATP-binding component (phnL). (247 aa)    
Predicted Functional Partners:
CRD_02069
Phosphonate ABC transporter, ATP-binding component (phnK).
 
0.999
CRD_02070
Phosphonate metabolism protein (phnJ).
 
 0.999
CRD_02071
Phosphonate metabolism protein (phnI).
 
 0.999
CRD_02072
Hypothetical protein.
 
 0.999
CRD_02075
Hypothetical protein.
 
 0.999
CRD_02067
Phosphonate metabolism protein (phnM).
 
 
 0.987
CRD_02066
Phosphonate metabolism protein.
 
 
 0.980
CRD_02073
Phosphonate metabolism protein.
 
 
 0.943
CRD_02076
Hypothetical protein.
 
  
 0.808
phnC
ABC tranporter, ATP-binding component (phnC); Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
   
0.726
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.