STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02150sxtL. (423 aa)    
Predicted Functional Partners:
CRD_01144
Putative uncharacterized protein.
  
 0.937
CRD_02151
sxtJ.
 
     0.875
CRD_02152
sxtI (Putative carbamoyltransferase).
 
     0.805
CRD_02149
sxtSUL.
     
 0.688
CRD_02128
Hypothetical protein.
  
  
  0.687
CRD_01071
Hypothetical protein.
  
  
  0.683
CRD_01601
Hypothetical protein.
  
     0.649
CRD_02342
Dienelactone hydrolase.
     
 0.540
CRD_02148
sxtDIOX; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
     
 0.538
CRD_02307
Non-ribosomal peptide synthase.
     
 0.516
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.