Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRD_00018 | CRD_01159 | CRD_00018 | CRD_01159 | NUDIX hydrolase. | Hypothetical protein; Belongs to the 5'-nucleotidase family. | 0.514 |
CRD_00018 | CRD_01372 | CRD_00018 | CRD_01372 | NUDIX hydrolase. | HAD-superfamily hydrolase, subfamily IA, variant 1. | 0.622 |
CRD_00018 | CRD_02158 | CRD_00018 | CRD_02158 | NUDIX hydrolase. | sxtB (Cytidine deaminase). | 0.582 |
CRD_00018 | prs | CRD_00018 | CRD_00498 | NUDIX hydrolase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.566 |
CRD_01159 | CRD_00018 | CRD_01159 | CRD_00018 | Hypothetical protein; Belongs to the 5'-nucleotidase family. | NUDIX hydrolase. | 0.514 |
CRD_01159 | CRD_01161 | CRD_01159 | CRD_01161 | Hypothetical protein; Belongs to the 5'-nucleotidase family. | Hypothetical protein. | 0.996 |
CRD_01159 | CRD_01372 | CRD_01159 | CRD_01372 | Hypothetical protein; Belongs to the 5'-nucleotidase family. | HAD-superfamily hydrolase, subfamily IA, variant 1. | 0.573 |
CRD_01159 | CRD_02158 | CRD_01159 | CRD_02158 | Hypothetical protein; Belongs to the 5'-nucleotidase family. | sxtB (Cytidine deaminase). | 0.731 |
CRD_01159 | CRD_02988 | CRD_01159 | CRD_02988 | Hypothetical protein; Belongs to the 5'-nucleotidase family. | Phosphoribulokinase/uridine kinase. | 0.694 |
CRD_01161 | CRD_01159 | CRD_01161 | CRD_01159 | Hypothetical protein. | Hypothetical protein; Belongs to the 5'-nucleotidase family. | 0.996 |
CRD_01161 | CRD_02158 | CRD_01161 | CRD_02158 | Hypothetical protein. | sxtB (Cytidine deaminase). | 0.713 |
CRD_01161 | CRD_02988 | CRD_01161 | CRD_02988 | Hypothetical protein. | Phosphoribulokinase/uridine kinase. | 0.697 |
CRD_01372 | CRD_00018 | CRD_01372 | CRD_00018 | HAD-superfamily hydrolase, subfamily IA, variant 1. | NUDIX hydrolase. | 0.622 |
CRD_01372 | CRD_01159 | CRD_01372 | CRD_01159 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Hypothetical protein; Belongs to the 5'-nucleotidase family. | 0.573 |
CRD_01372 | CRD_02158 | CRD_01372 | CRD_02158 | HAD-superfamily hydrolase, subfamily IA, variant 1. | sxtB (Cytidine deaminase). | 0.555 |
CRD_01372 | CRD_02988 | CRD_01372 | CRD_02988 | HAD-superfamily hydrolase, subfamily IA, variant 1. | Phosphoribulokinase/uridine kinase. | 0.453 |
CRD_02157 | CRD_02158 | CRD_02157 | CRD_02158 | sxtA. | sxtB (Cytidine deaminase). | 0.590 |
CRD_02157 | sxtC | CRD_02157 | CRD_02159 | sxtA. | Hypothetical protein. | 0.658 |
CRD_02158 | CRD_00018 | CRD_02158 | CRD_00018 | sxtB (Cytidine deaminase). | NUDIX hydrolase. | 0.582 |
CRD_02158 | CRD_01159 | CRD_02158 | CRD_01159 | sxtB (Cytidine deaminase). | Hypothetical protein; Belongs to the 5'-nucleotidase family. | 0.731 |
page 1 of 2