STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02349Integral membrane components of other binding- protein-dependent transport system. (263 aa)    
Predicted Functional Partners:
CRD_02350
TauA, ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
 
 
 0.975
CRD_02591
Nitrate transport ATP-binding subunits C and D.
 
 0.974
CRD_02348
Nitrate transport ATP-binding subunits C and D.
 
 0.970
CRD_02364
Molybdate ABC transporter, permease protein.
 
  
 0.968
CRD_00911
Nitrate transport ATP-binding subunits C and D.
  
 
 0.960
CRD_02590
nrtC.
  
 
 0.960
CRD_00720
Nitrate transport ATP-binding subunits C and D.
 
 0.902
CRD_00740
ABC transporter, substrate-binding protein, aliphatic sulphonates.
  
 
  0.881
CRD_00739
ABC transporter, substrate-binding protein, aliphatic sulphonates.
  
 
  0.858
CRD_00726
ABC transporter, substrate-binding protein, aliphatic sulphonates.
  
 
  0.848
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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