STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02460Asparagine synthase. (594 aa)    
Predicted Functional Partners:
CRD_00957
Glutamine amidotransferase, class-II.
  
 
 0.754
CRD_00376
Delta-1-pyrroline-5-carboxylate dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
    
 0.704
CRD_00377
Hypothetical protein.
    
 0.704
CRD_02643
L-asparaginase II.
     
  0.696
CRD_02461
Glycosyl transferase, group 1.
       0.661
CRD_02307
Non-ribosomal peptide synthase.
  
 
 0.628
CRD_02459
Glycosyltransferase.
      0.611
CRD_01239
Asparagine synthase (Glutamine-hydrolyzing).
  
  
 
0.588
CRD_01242
Putative asparagine synthase (Glutamine- hydrolyzing).
  
  
 
0.585
CRD_00082
Aminotransferase, class I and II.
     
  0.574
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.