STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02502Phospholipase D/Transphosphatidylase. (477 aa)    
Predicted Functional Partners:
CRD_02515
Hypothetical protein.
  
     0.649
CRD_01710
Small GTP-binding protein domain protein.
  
 
  0.622
CRD_00500
CO2 hydration protein.
  
     0.615
CRD_02724
Conserved hypothetical protein.
  
     0.599
CRD_02501
Aromatic amino acid beta-eliminating lyase/threonine aldolase.
       0.571
CRD_00405
Small GTP-binding protein domain protein.
  
 
  0.565
CRD_02307
Non-ribosomal peptide synthase.
   
 0.563
CRD_01908
Conserved hypothetical protein.
  
 
 
 0.557
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.553
CRD_00459
Mo-dependent nitrogenase-like protein.
  
     0.545
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.