STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02556Two Component Transcriptional Regulator, LuxR family. (229 aa)    
Predicted Functional Partners:
CRD_00257
Multi-component Transcriptional regulator, Winged helix family.
 
0.983
CRD_01250
Hypothetical protein.
  
 0.976
CRD_00899
Multi-sensor Hybrid Histidine Kinase.
 
 
 0.970
CRD_01901
Multi-sensor Signal Transduction Histidine Kinase.
 0.963
CRD_00818
Sensor protein.
 
 0.953
CRD_00368
Response Regulator Receiver Signal Transduction Histidine Kinase.
 
 0.944
CRD_02192
Multi-sensor Hybrid Histidine Kinase.
 
 
 0.907
CRD_02540
Histidine Kinase.
 
 
 0.894
CRD_00494
Hypothetical protein.
 
 0.892
CRD_00661
Multi-sensor Signal Transduction Histidine Kinase.
 0.876
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.