STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02617Hypothetical protein. (138 aa)    
Predicted Functional Partners:
CRD_02616
Amine oxidase.
     0.993
CRD_02982
Squalene/phytoene synthase.
 
  
 0.799
CRD_02378
NnrU.
  
     0.710
CRD_02615
Streptomyces cyclase/dehydrase.
 
     0.684
CRD_00929
Conserved hypothetical protein.
  
     0.676
CRD_01592
Photosystem II manganese-stabilizing protein PsbO.
  
     0.660
CRD_03034
Protein of unknown function DUF1350.
  
     0.651
CRD_03049
Conserved hypothetical protein.
  
     0.587
CRD_00928
Conserved hypothetical protein.
  
     0.586
CRD_02057
Glycosyl hydrolase, BNR repeat protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.570
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.