STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRD_02683Extracellular ligand-binding receptor. (431 aa)    
Predicted Functional Partners:
CRD_01424
Permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
CRD_02199
ABC transporter-like protein.
 
 
 0.952
CRD_02696
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.946
CRD_01396
ATP-binding protein of branched-chain amino acid ABC transporter.
 
 
 0.929
CRD_02954
Inner-membrane translocator; Overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.775
CRD_02953
Inner-membrane translocator; Overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.732
CRD_02957
ABC transporter-like protein.
 
 
 0.716
CRD_02747
Substrate-binding region protein of ABC-type glycine betaine transport system.
     
 0.608
CRD_02638
Hypothetical protein.
  
 
  0.598
CRD_01250
Hypothetical protein.
   
 0.590
Your Current Organism:
Raphidiopsis brookii
NCBI taxonomy Id: 533247
Other names: R. brookii D9, Raphidiopsis brookii D9, Raphidiopsis sp. D9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.