STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y032_0356g3359AAA_12 domain-containing protein. (100 aa)    
Predicted Functional Partners:
Y032_0011g1510
Smg4_UPF3 domain-containing protein.
    
 0.883
Y032_0128g1452
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.
    
 0.818
Y032_0459g1842
MIF4G domain-containing protein.
    
 0.797
Y032_0484g2306
Uncharacterized protein.
   
 0.796
Y032_0484g2307
Upf2 domain-containing protein.
   
 0.796
Y032_0012g1833
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.771
Y032_0450g1678
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.771
Y032_0013g1998
Btz domain-containing protein.
    
 0.757
Y032_0005g2724
RRM domain-containing protein.
    
 0.753
Y032_0200g1699
Uncharacterized protein.
    
 0.712
Your Current Organism:
Ancylostoma ceylanicum
NCBI taxonomy Id: 53326
Other names: A. ceylanicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.