Y032_0199g1676 protein (Ancylostoma ceylanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Y032_0199g1676

Uncharacterized protein. (106 aa)

Predicted Functional Partners:

Y032_0263g606

0.556

Y032_0063g3467

0.532

Y032_0409g932

0.518

Y032_0003g1605

0.506

Y032_0003g1606

0.506

Y032_0253g277

0.476

Y032_0300g1797

0.460

Y032_0050g2056

0.460

Y032_0014g2319

0.460

Acey_s0001.g19

0.460

Your Current Organism:

Ancylostoma ceylanicum

NCBI taxonomy Id: 53326
Other names: A. ceylanicum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acey_s0001.g19	Y032_0199g1676	A0A016W3X3	A0A016SP12	Uncharacterized protein.	Uncharacterized protein.	0.460
Acey_s0001.g19	Y032_0263g606	A0A016W3X3	A0A016S9X0	Uncharacterized protein.	Uncharacterized protein.	0.621
Y032_0003g1605	Y032_0063g3467	A0A016VZP0	A0A016U113	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein.	0.641
Y032_0003g1605	Y032_0199g1676	A0A016VZP0	A0A016SP12	Adenylyl cyclase-associated protein; Belongs to the CAP family.	Uncharacterized protein.	0.506
Y032_0003g1605	Y032_0409g932	A0A016VZP0	A0A016X2F0	Adenylyl cyclase-associated protein; Belongs to the CAP family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.650
Y032_0003g1606	Y032_0063g3467	A0A016W0E8	A0A016U113	CAP_N domain-containing protein.	Uncharacterized protein.	0.641
Y032_0003g1606	Y032_0199g1676	A0A016W0E8	A0A016SP12	CAP_N domain-containing protein.	Uncharacterized protein.	0.506
Y032_0003g1606	Y032_0409g932	A0A016W0E8	A0A016X2F0	CAP_N domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.650
Y032_0014g2319	Y032_0063g3467	A0A016VA12	A0A016U113	Uncharacterized protein.	Uncharacterized protein.	0.539
Y032_0014g2319	Y032_0199g1676	A0A016VA12	A0A016SP12	Uncharacterized protein.	Uncharacterized protein.	0.460
Y032_0014g2319	Y032_0263g606	A0A016VA12	A0A016S9X0	Uncharacterized protein.	Uncharacterized protein.	0.621
Y032_0014g2319	Y032_0409g932	A0A016VA12	A0A016X2F0	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.523
Y032_0050g2056	Y032_0199g1676	A0A016UAS9	A0A016SP12	Uncharacterized protein.	Uncharacterized protein.	0.460
Y032_0050g2056	Y032_0263g606	A0A016UAS9	A0A016S9X0	Uncharacterized protein.	Uncharacterized protein.	0.621
Y032_0063g3467	Y032_0003g1605	A0A016U113	A0A016VZP0	Uncharacterized protein.	Adenylyl cyclase-associated protein; Belongs to the CAP family.	0.641
Y032_0063g3467	Y032_0003g1606	A0A016U113	A0A016W0E8	Uncharacterized protein.	CAP_N domain-containing protein.	0.641
Y032_0063g3467	Y032_0014g2319	A0A016U113	A0A016VA12	Uncharacterized protein.	Uncharacterized protein.	0.539
Y032_0063g3467	Y032_0199g1676	A0A016U113	A0A016SP12	Uncharacterized protein.	Uncharacterized protein.	0.532
Y032_0063g3467	Y032_0263g606	A0A016U113	A0A016S9X0	Uncharacterized protein.	Uncharacterized protein.	0.622
Y032_0063g3467	Y032_0409g932	A0A016U113	A0A016X2F0	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.965