STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y032_0191g1300Uncharacterized protein. (366 aa)    
Predicted Functional Partners:
Y032_0689g1561
Uncharacterized protein.
    
  0.735
Y032_0488g2360
Uncharacterized protein.
    
  0.735
Y032_0020g178
Uncharacterized protein.
   
 0.711
Y032_0020g177
Uncharacterized protein.
   
 0.711
Y032_0039g101
Uncharacterized protein.
    
 0.701
Acey_s0247.g55
E3 ubiquitin-protein ligase.
    
 0.683
Y032_0007g3394
ANK_REP_REGION domain-containing protein.
   
 0.661
Y032_0067g134
FERM domain-containing protein.
    
 0.658
Y032_0021g450
ZnMc domain-containing protein.
    
 0.636
Y032_0965g3236
PID domain-containing protein.
   
 0.609
Your Current Organism:
Ancylostoma ceylanicum
NCBI taxonomy Id: 53326
Other names: A. ceylanicum
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