Y032_0170g263 protein (Ancylostoma ceylanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Y032_0170g263

TOPEUc domain-containing protein. (557 aa)

Predicted Functional Partners:

Y032_0170g261

0.947

Y032_0175g483

0.946

Y032_0243g3503

0.881

Y032_0012g1799

0.851

Y032_0069g394

0.842

Y032_0098g3079

0.833

Y032_0053g2312

0.829

Y032_0397g693

0.827

Y032_0004g1966

0.827

ANCCEY_11191

0.806

Your Current Organism:

Ancylostoma ceylanicum

NCBI taxonomy Id: 53326
Other names: A. ceylanicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANCCEY_11191	Y032_0004g1966	A0A016S1Q8	A0A016VUQ3	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.977
ANCCEY_11191	Y032_0012g1799	A0A016S1Q8	A0A016VCV9	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.542
ANCCEY_11191	Y032_0053g2312	A0A016S1Q8	A0A016U6L0	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.988
ANCCEY_11191	Y032_0170g261	A0A016S1Q8	A0A016SVP8	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	TOPEUc domain-containing protein.	0.806
ANCCEY_11191	Y032_0170g263	A0A016S1Q8	A0A016SW76	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	TOPEUc domain-containing protein.	0.806
ANCCEY_11191	Y032_0175g483	A0A016S1Q8	A0A016STS8	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	TOPEUc domain-containing protein.	0.806
ANCCEY_11191	Y032_0397g693	A0A016S1Q8	A0A016RRZ1	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	Uncharacterized protein.	0.997
Y032_0004g1966	ANCCEY_11191	A0A016VUQ3	A0A016S1Q8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	0.977
Y032_0004g1966	Y032_0012g1799	A0A016VUQ3	A0A016VCV9	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.996
Y032_0004g1966	Y032_0053g2312	A0A016VUQ3	A0A016U6L0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.960
Y032_0004g1966	Y032_0098g3079	A0A016VUQ3	A0A016TJ55	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.855
Y032_0004g1966	Y032_0170g261	A0A016VUQ3	A0A016SVP8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	TOPEUc domain-containing protein.	0.827
Y032_0004g1966	Y032_0170g263	A0A016VUQ3	A0A016SW76	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	TOPEUc domain-containing protein.	0.827
Y032_0004g1966	Y032_0175g483	A0A016VUQ3	A0A016STS8	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	TOPEUc domain-containing protein.	0.827
Y032_0004g1966	Y032_0243g3503	A0A016VUQ3	A0A016SEG6	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.696
Y032_0004g1966	Y032_0397g693	A0A016VUQ3	A0A016RRZ1	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.989
Y032_0012g1799	ANCCEY_11191	A0A016VCV9	A0A016S1Q8	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Ubiquitin--protein ligase; Belongs to the ubiquitin-conjugating enzyme family.	0.542
Y032_0012g1799	Y032_0004g1966	A0A016VCV9	A0A016VUQ3	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.996
Y032_0012g1799	Y032_0053g2312	A0A016VCV9	A0A016U6L0	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Uncharacterized protein.	0.572
Y032_0012g1799	Y032_0098g3079	A0A016VCV9	A0A016TJ55	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	Uncharacterized protein.	0.974