Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANCCEY_13945 | Y032_0038g3663 | A0A016UB69 | A0A016UK00 | Helix-loop-helix DNA-binding domain protein. | CS domain-containing protein. | 0.468 |
ANCCEY_13945 | Y032_0048g1691 | A0A016UB69 | A0A016UCB1 | Helix-loop-helix DNA-binding domain protein. | Uncharacterized protein. | 0.615 |
ANCCEY_13945 | Y032_0103g3527 | A0A016UB69 | A0A016TGW5 | Helix-loop-helix DNA-binding domain protein. | Uncharacterized protein. | 0.497 |
ANCCEY_13945 | Y032_0206g1969 | A0A016UB69 | A0A016SL02 | Helix-loop-helix DNA-binding domain protein. | Uncharacterized protein. | 0.806 |
Y032_0004g2112 | Y032_0038g3663 | A0A016VVB6 | A0A016UK00 | Uncharacterized protein. | CS domain-containing protein. | 0.451 |
Y032_0004g2112 | Y032_0048g1691 | A0A016VVB6 | A0A016UCB1 | Uncharacterized protein. | Uncharacterized protein. | 0.615 |
Y032_0004g2112 | Y032_0103g3527 | A0A016VVB6 | A0A016TGW5 | Uncharacterized protein. | Uncharacterized protein. | 0.497 |
Y032_0004g2112 | Y032_0206g1969 | A0A016VVB6 | A0A016SL02 | Uncharacterized protein. | Uncharacterized protein. | 0.806 |
Y032_0033g2645 | Y032_0048g1691 | A0A016UNH1 | A0A016UCB1 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.574 |
Y032_0033g2645 | Y032_0202g1770 | A0A016UNH1 | A0A016SN48 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.993 |
Y032_0033g2645 | Y032_0206g1969 | A0A016UNH1 | A0A016SL02 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.995 |
Y032_0038g3663 | ANCCEY_13945 | A0A016UK00 | A0A016UB69 | CS domain-containing protein. | Helix-loop-helix DNA-binding domain protein. | 0.468 |
Y032_0038g3663 | Y032_0004g2112 | A0A016UK00 | A0A016VVB6 | CS domain-containing protein. | Uncharacterized protein. | 0.451 |
Y032_0038g3663 | Y032_0048g1691 | A0A016UK00 | A0A016UCB1 | CS domain-containing protein. | Uncharacterized protein. | 0.585 |
Y032_0038g3663 | Y032_0471g2056 | A0A016UK00 | A0A016WX31 | CS domain-containing protein. | HATPase_c domain-containing protein. | 0.971 |
Y032_0048g1691 | ANCCEY_13945 | A0A016UCB1 | A0A016UB69 | Uncharacterized protein. | Helix-loop-helix DNA-binding domain protein. | 0.615 |
Y032_0048g1691 | Y032_0004g2112 | A0A016UCB1 | A0A016VVB6 | Uncharacterized protein. | Uncharacterized protein. | 0.615 |
Y032_0048g1691 | Y032_0033g2645 | A0A016UCB1 | A0A016UNH1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.574 |
Y032_0048g1691 | Y032_0038g3663 | A0A016UCB1 | A0A016UK00 | Uncharacterized protein. | CS domain-containing protein. | 0.585 |
Y032_0048g1691 | Y032_0081g1413 | A0A016UCB1 | A0A016TSA9 | Uncharacterized protein. | Uncharacterized protein. | 0.670 |
page 1 of 3