STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y032_0034g2894Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (852 aa)    
Predicted Functional Partners:
Y032_0131g1648
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.996
Y032_0008g151
CP-type G domain-containing protein.
   
 
 0.996
Y032_0111g252
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.995
Y032_0473g2078
WD_REPEATS_REGION domain-containing protein.
   
 
 0.995
Y032_0003g1510
RRM domain-containing protein.
   
 
 0.992
ANCCEY_07464
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.991
Y032_0050g1942
Peptidase_M24 domain-containing protein.
   
 
 0.990
Y032_0069g366
Uncharacterized protein.
   
 
 0.989
ANCCEY_10139
Ribosomal protein L24e.
   
 
 0.988
Y032_0196g1519
C2H2-type domain-containing protein.
   
 
 0.986
Your Current Organism:
Ancylostoma ceylanicum
NCBI taxonomy Id: 53326
Other names: A. ceylanicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.