Y032_0022g473 protein (Ancylostoma ceylanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Y032_0022g473

eIF-5a domain-containing protein. (206 aa)

Predicted Functional Partners:

Y032_0206g1969

0.999

ANCCEY_00642

0.999

Y032_0106g3766

0.999

Y032_0009g805

0.999

Y032_0005g2327

0.999

Y032_0003g1229

0.999

Y032_0333g2822

0.998

Y032_0041g491

0.998

Y032_0380g333

0.997

Y032_0371g113

0.997

Your Current Organism:

Ancylostoma ceylanicum

NCBI taxonomy Id: 53326
Other names: A. ceylanicum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANCCEY_00642	Y032_0003g1229	A0A016T444	A0A016VYC1	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.999
ANCCEY_00642	Y032_0005g2327	A0A016T444	A0A016VQQ4	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.999
ANCCEY_00642	Y032_0009g805	A0A016T444	A0A016VJ25	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
ANCCEY_00642	Y032_0022g473	A0A016T444	A0A016UYR0	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	eIF-5a domain-containing protein.	0.999
ANCCEY_00642	Y032_0041g491	A0A016T444	A0A016UGQ6	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.999
ANCCEY_00642	Y032_0106g3766	A0A016T444	A0A016TG78	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ANCCEY_00642	Y032_0206g1969	A0A016T444	A0A016SL02	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.999
ANCCEY_00642	Y032_0333g2822	A0A016T444	A0A016S038	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.999
ANCCEY_00642	Y032_0371g113	A0A016T444	A0A016RUU6	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
ANCCEY_00642	Y032_0380g333	A0A016T444	A0A016RUB4	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	HIT-type domain-containing protein.	0.999
Y032_0003g1229	ANCCEY_00642	A0A016VYC1	A0A016T444	Uncharacterized protein.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
Y032_0003g1229	Y032_0005g2327	A0A016VYC1	A0A016VQQ4	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.999
Y032_0003g1229	Y032_0009g805	A0A016VYC1	A0A016VJ25	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
Y032_0003g1229	Y032_0022g473	A0A016VYC1	A0A016UYR0	Uncharacterized protein.	eIF-5a domain-containing protein.	0.999
Y032_0003g1229	Y032_0041g491	A0A016VYC1	A0A016UGQ6	Uncharacterized protein.	Uncharacterized protein.	0.999
Y032_0003g1229	Y032_0106g3766	A0A016VYC1	A0A016TG78	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
Y032_0003g1229	Y032_0206g1969	A0A016VYC1	A0A016SL02	Uncharacterized protein.	Uncharacterized protein.	0.999
Y032_0003g1229	Y032_0333g2822	A0A016VYC1	A0A016S038	Uncharacterized protein.	Uncharacterized protein.	0.999
Y032_0003g1229	Y032_0371g113	A0A016VYC1	A0A016RUU6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.999
Y032_0003g1229	Y032_0380g333	A0A016VYC1	A0A016RUB4	Uncharacterized protein.	HIT-type domain-containing protein.	0.999