Y032_0006g2871 protein (Ancylostoma ceylanicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Y032_0006g2871

Uncharacterized protein. (280 aa)

Predicted Functional Partners:

ANCCEY_07464

0.987

Y032_0069g394

0.980

Y032_0290g1520

0.976

Y032_0014g2483

0.976

Y032_0003g1510

0.974

Y032_0002g658

0.964

Y032_0046g1333

0.961

Y032_0014g2444

0.960

Y032_0003g1487

0.957

Y032_0301g1823

0.955

Your Current Organism:

Ancylostoma ceylanicum

NCBI taxonomy Id: 53326
Other names: A. ceylanicum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANCCEY_07464	Y032_0002g658	A0A016SL66	A0A016W029	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.905
ANCCEY_07464	Y032_0003g1487	A0A016SL66	A0A016VYZ9	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.935
ANCCEY_07464	Y032_0003g1510	A0A016SL66	A0A016VZ45	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	RRM domain-containing protein.	0.998
ANCCEY_07464	Y032_0006g2871	A0A016SL66	A0A016VNT5	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.987
ANCCEY_07464	Y032_0014g2444	A0A016SL66	A0A016VC65	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.999
ANCCEY_07464	Y032_0014g2483	A0A016SL66	A0A016VAC5	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Brix domain-containing protein.	0.992
ANCCEY_07464	Y032_0046g1333	A0A016SL66	A0A016UBV3	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	KH_8 domain-containing protein.	0.892
ANCCEY_07464	Y032_0069g394	A0A016SL66	A0A016TYU7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.983
ANCCEY_07464	Y032_0290g1520	A0A016SL66	A0A016S5M7	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.995
ANCCEY_07464	Y032_0301g1823	A0A016SL66	A0A016S3P2	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	Uncharacterized protein.	0.999
Y032_0002g658	ANCCEY_07464	A0A016W029	A0A016SL66	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.905
Y032_0002g658	Y032_0003g1487	A0A016W029	A0A016VYZ9	Uncharacterized protein.	Uncharacterized protein.	0.999
Y032_0002g658	Y032_0003g1510	A0A016W029	A0A016VZ45	Uncharacterized protein.	RRM domain-containing protein.	0.935
Y032_0002g658	Y032_0006g2871	A0A016W029	A0A016VNT5	Uncharacterized protein.	Uncharacterized protein.	0.964
Y032_0002g658	Y032_0014g2444	A0A016W029	A0A016VC65	Uncharacterized protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.929
Y032_0002g658	Y032_0014g2483	A0A016W029	A0A016VAC5	Uncharacterized protein.	Brix domain-containing protein.	0.941
Y032_0002g658	Y032_0046g1333	A0A016W029	A0A016UBV3	Uncharacterized protein.	KH_8 domain-containing protein.	0.999
Y032_0002g658	Y032_0069g394	A0A016W029	A0A016TYU7	Uncharacterized protein.	Uncharacterized protein.	0.953
Y032_0002g658	Y032_0290g1520	A0A016W029	A0A016S5M7	Uncharacterized protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.947
Y032_0002g658	Y032_0301g1823	A0A016W029	A0A016S3P2	Uncharacterized protein.	Uncharacterized protein.	0.929