STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN44312.13-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase. (119 aa)    
Predicted Functional Partners:
SFN51681.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
 
  0.975
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 0.971
SFN44372.1
Acyl carrier protein.
 
 0.969
SFN44432.1
Beta-ketoacyl synthase, N-terminal domain.
 
 0.968
SFN44272.1
acyl-CoA thioester hydrolase.
 
  
 0.961
SFN44323.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
  
 0.961
SFN44288.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.956
SFN44338.1
Uncharacterized membrane protein.
 
    0.954
SFN44225.1
Protein of unknown function.
 
     0.953
SFN44237.1
Predicted exporter.
 
     0.953
Your Current Organism:
Xenorhabdus japonica
NCBI taxonomy Id: 53341
Other names: DSM 16522, IAM 14265, JCM 21111, X. japonica, Xenorhabdus japonicus
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