Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN52769.1 | SFN79956.1 | SAMN05421579_10767 | SAMN05421579_1233 | TIGR02099 family protein. | 50S ribosomal protein L16 3-hydroxylase. | 0.447 |
SFN60661.1 | SFN79956.1 | SAMN05421579_11144 | SAMN05421579_1233 | Ribosomal protein S12 methylthiotransferase accessory factor. | 50S ribosomal protein L16 3-hydroxylase. | 0.462 |
SFN71982.1 | SFN79956.1 | SAMN05421579_11727 | SAMN05421579_1233 | Hypothetical protein. | 50S ribosomal protein L16 3-hydroxylase. | 0.401 |
SFN79925.1 | SFN79938.1 | SAMN05421579_1231 | SAMN05421579_1232 | Two-component system, OmpR family, response regulator PhoP. | Two-component system, OmpR family, sensor histidine kinase PhoQ. | 0.997 |
SFN79925.1 | SFN79956.1 | SAMN05421579_1231 | SAMN05421579_1233 | Two-component system, OmpR family, response regulator PhoP. | 50S ribosomal protein L16 3-hydroxylase. | 0.440 |
SFN79938.1 | SFN79925.1 | SAMN05421579_1232 | SAMN05421579_1231 | Two-component system, OmpR family, sensor histidine kinase PhoQ. | Two-component system, OmpR family, response regulator PhoP. | 0.997 |
SFN79938.1 | SFN79956.1 | SAMN05421579_1232 | SAMN05421579_1233 | Two-component system, OmpR family, sensor histidine kinase PhoQ. | 50S ribosomal protein L16 3-hydroxylase. | 0.547 |
SFN79956.1 | SFN52769.1 | SAMN05421579_1233 | SAMN05421579_10767 | 50S ribosomal protein L16 3-hydroxylase. | TIGR02099 family protein. | 0.447 |
SFN79956.1 | SFN60661.1 | SAMN05421579_1233 | SAMN05421579_11144 | 50S ribosomal protein L16 3-hydroxylase. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.462 |
SFN79956.1 | SFN71982.1 | SAMN05421579_1233 | SAMN05421579_11727 | 50S ribosomal protein L16 3-hydroxylase. | Hypothetical protein. | 0.401 |
SFN79956.1 | SFN79925.1 | SAMN05421579_1233 | SAMN05421579_1231 | 50S ribosomal protein L16 3-hydroxylase. | Two-component system, OmpR family, response regulator PhoP. | 0.440 |
SFN79956.1 | SFN79938.1 | SAMN05421579_1233 | SAMN05421579_1232 | 50S ribosomal protein L16 3-hydroxylase. | Two-component system, OmpR family, sensor histidine kinase PhoQ. | 0.547 |
SFN79956.1 | rplP | SAMN05421579_1233 | SAMN05421579_14513 | 50S ribosomal protein L16 3-hydroxylase. | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.914 |
rplP | SFN79956.1 | SAMN05421579_14513 | SAMN05421579_1233 | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 50S ribosomal protein L16 3-hydroxylase. | 0.914 |