STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN98915.1L-amino acid N-acyltransferase YncA. (150 aa)    
Predicted Functional Partners:
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.756
SFN98932.1
Hypothetical protein; Belongs to the LOG family.
       0.651
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.503
SFN96978.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.483
SFN37811.1
Cyanate permease.
  
     0.456
SFN98949.1
Inner membrane transporter RhtA.
       0.451
SFN49455.1
Major Facilitator Superfamily protein.
  
     0.416
Your Current Organism:
Xenorhabdus japonica
NCBI taxonomy Id: 53341
Other names: DSM 16522, IAM 14265, JCM 21111, X. japonica, Xenorhabdus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.