STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO07716.1Novel toxin 15. (162 aa)    
Predicted Functional Partners:
SFN97256.1
Subtilase-type serine protease.
  
 
 0.761
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.699
SFN37749.1
acyl-CoA thioesterase-1.
   
 0.636
SFO08342.1
Lysophospholipase L1.
   
 0.636
SFO07730.1
Hypothetical protein.
      
0.586
SFO07746.1
Filamentous hemagglutinin.
      
0.586
SFO07758.1
Hypothetical protein.
       0.586
SFO07702.1
Hypothetical protein.
      
0.462
SFN56516.1
Amino acid adenylation domain-containing protein.
   
 
 0.454
SFO07775.1
Protein of unknown function.
   
   0.428
Your Current Organism:
Xenorhabdus japonica
NCBI taxonomy Id: 53341
Other names: DSM 16522, IAM 14265, JCM 21111, X. japonica, Xenorhabdus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.