| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LIU_01890 | LIU_03895 | LIU_01890 | LIU_03895 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.514 |
| LIU_01890 | LIU_05040 | LIU_01890 | LIU_05040 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
| LIU_01890 | LIU_06415 | LIU_01890 | LIU_06415 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| LIU_01890 | LIU_09505 | LIU_01890 | LIU_09505 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| LIU_01890 | LIU_12430 | LIU_01890 | LIU_12430 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.504 |
| LIU_01890 | dnaB_1 | LIU_01890 | LIU_01295 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.794 |
| LIU_01890 | ligA | LIU_01890 | LIU_09390 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic ring-opening dioxygenase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.470 |
| LIU_01890 | polA | LIU_01890 | LIU_09075 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.885 |
| LIU_01890 | recA | LIU_01890 | LIU_02100 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.483 |
| LIU_01890 | topA | LIU_01890 | LIU_06570 | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.504 |
| LIU_03895 | LIU_01890 | LIU_03895 | LIU_01890 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.514 |
| LIU_03895 | LIU_05040 | LIU_03895 | LIU_05040 | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| LIU_05040 | LIU_01890 | LIU_05040 | LIU_01890 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
| LIU_05040 | LIU_03895 | LIU_05040 | LIU_03895 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| LIU_06415 | LIU_01890 | LIU_06415 | LIU_01890 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| LIU_06415 | LIU_12430 | LIU_06415 | LIU_12430 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
| LIU_06415 | dnaB_1 | LIU_06415 | LIU_01295 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.582 |
| LIU_06415 | polA | LIU_06415 | LIU_09075 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.924 |
| LIU_06415 | recA | LIU_06415 | LIU_02100 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.786 |
| LIU_06415 | topA | LIU_06415 | LIU_06570 | Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.875 |