close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIU_03490AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)    
Predicted Functional Partners:
LIU_03960
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.775
LIU_05040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.767
LIU_10785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
LIU_10050
Glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
LIU_05455
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.741
LIU_05435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
LIU_08120
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
LIU_05025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
LIU_08130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.656
LIU_00370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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