Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LIU_05185 | corA_1 | LIU_05185 | LIU_05190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
LIU_05195 | corA_1 | LIU_05195 | LIU_05190 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
LIU_05195 | mraZ | LIU_05195 | LIU_05200 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | 0.821 |
LIU_05195 | rsmH | LIU_05195 | LIU_05205 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.809 |
corA_1 | LIU_05185 | LIU_05190 | LIU_05185 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
corA_1 | LIU_05195 | LIU_05190 | LIU_05195 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
corA_1 | mraZ | LIU_05190 | LIU_05200 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | 0.433 |
corA_1 | rsmH | LIU_05190 | LIU_05205 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.400 |
mraZ | LIU_05195 | LIU_05200 | LIU_05195 | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
mraZ | corA_1 | LIU_05200 | LIU_05190 | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
mraZ | rsmH | LIU_05200 | LIU_05205 | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.997 |
rsmH | LIU_05195 | LIU_05205 | LIU_05195 | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
rsmH | corA_1 | LIU_05205 | LIU_05190 | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
rsmH | mraZ | LIU_05205 | LIU_05200 | 16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | Protein MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family. | 0.997 |