STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIU_06280Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (862 aa)    
Predicted Functional Partners:
mprF
lysyl-tRNA synthetase; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
  
 
0.925
xylF
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.792
LIU_06290
Transglycosylase SLT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
LIU_03615
Adenine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.510
LIU_06420
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.499
LIU_08425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.486
LIU_05675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.483
LIU_05455
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.469
LIU_06295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
LIU_05015
D-alanyl transfer protein DltD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.453
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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