STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIU_08025Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)    
Predicted Functional Partners:
LIU_12950
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.926
LIU_12970
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.920
LIU_04495
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
LIU_04590
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
LIU_10750
6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
LIU_10755
Diacetylchitobiose-6-phosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.912
LIU_12405
aryl-phospho-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
LIU_08240
Oligo-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.910
LIU_04030
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.688
LIU_03500
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.603
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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