STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gapA_3GapA; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
LIU_08615
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.947
LIU_08610
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.944
gapB_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.810
LIU_08625
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
LIU_08630
Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.674
LIU_10050
Glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
LIU_10785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
LIU_08635
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.
       0.526
LIU_05040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
LIU_08655
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.510
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.