STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIU_08855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
LIU_08860
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.985
LIU_08850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.842
LIU_03960
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.776
LIU_08130
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.642
LIU_07520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
LIU_03465
Rhamnogalacturonan acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.602
LIU_04390
Acetyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.602
LIU_06515
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.602
LIU_08105
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.602
LIU_10420
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.602
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.