Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LIU_12945Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)    
Predicted Functional Partners:
LIU_12950
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.795
LIU_12955
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.726
crr
Sugar permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.706
LIU_03500
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.517
LIU_12960
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.465
LIU_12975
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.464
LIU_12965
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.460
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.458
LIU_09230
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.411
LIU_12970
Alpha-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.407
Your Current Organism:
Enterococcus durans
NCBI taxonomy Id: 53345
Other names: ATCC 19432, CCUG 7972, CIP 55.125, DSM 20633, E. durans, Enterococcus sp. VJI19, JCM 8725, LMG 10746, LMG:10746, NBRC 100479, NCDO 596, NCIMB 700596, NCTC 8307, Streptococcus durans, strain 98D
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