Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NifJ | aroC | A5802_001265 | A5802_000067 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.977 |
NifJ | aroE | A5802_001265 | A5802_000988 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.735 |
NifJ | aroK | A5802_001265 | A5802_000070 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.401 |
OTP25352.1 | OTP26357.1 | A5802_002505 | A5802_000068 | Chorismate mutase. | Hypothetical protein. | 0.750 |
OTP25352.1 | OTP27325.1 | A5802_002505 | A5802_001060 | Chorismate mutase. | Hypothetical protein. | 0.585 |
OTP25352.1 | aroA | A5802_002505 | A5802_000069 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.760 |
OTP25352.1 | aroC | A5802_002505 | A5802_000067 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.751 |
OTP25352.1 | aroE | A5802_002505 | A5802_000988 | Chorismate mutase. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.613 |
OTP25352.1 | aroF | A5802_002505 | A5802_000065 | Chorismate mutase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.627 |
OTP25352.1 | aroK | A5802_002505 | A5802_000070 | Chorismate mutase. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.674 |
OTP25352.1 | pheA | A5802_002505 | A5802_000071 | Chorismate mutase. | Hypothetical protein. | 0.413 |
OTP26357.1 | OTP25352.1 | A5802_000068 | A5802_002505 | Hypothetical protein. | Chorismate mutase. | 0.750 |
OTP26357.1 | OTP27325.1 | A5802_000068 | A5802_001060 | Hypothetical protein. | Hypothetical protein. | 0.434 |
OTP26357.1 | aroA | A5802_000068 | A5802_000069 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.998 |
OTP26357.1 | aroB | A5802_000068 | A5802_000066 | Hypothetical protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.978 |
OTP26357.1 | aroC | A5802_000068 | A5802_000067 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.986 |
OTP26357.1 | aroE | A5802_000068 | A5802_000988 | Hypothetical protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.832 |
OTP26357.1 | aroF | A5802_000068 | A5802_000065 | Hypothetical protein. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.950 |
OTP26357.1 | aroK | A5802_000068 | A5802_000070 | Hypothetical protein. | Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.968 |
OTP26357.1 | pheA | A5802_000068 | A5802_000071 | Hypothetical protein. | Hypothetical protein. | 0.997 |
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