STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTP27294.1ATP-dependent protease ATP-binding subunit ClpX. (746 aa)    
Predicted Functional Partners:
OTP27295.1
Hypothetical protein.
 
     0.924
OTP27296.1
DegV family EDD protein.
  
    0.795
OTP22158.1
Hypothetical protein.
 
    0.749
OTP20024.1
Hypothetical protein.
 
    0.749
OTP22162.1
Hypothetical protein.
  
     0.733
OTP20028.1
Hypothetical protein.
  
     0.733
OTP22139.1
Hypothetical protein.
  
     0.709
OTP20005.1
Hypothetical protein.
  
     0.709
OTP26612.1
Hypothetical protein.
  
     0.707
OTP22144.1
Hypothetical protein.
  
     0.699
Your Current Organism:
Enterococcus mundtii
NCBI taxonomy Id: 53346
Other names: ATCC 43186, CCUG 18656, CFBP 4251, CIP 103010, DSM 4838, E. mundtii, Enterobacter sp. PX-E.sp.Jor, JCM 8731, LMG 10748, LMG:10748, MUTK 559, NBRC 100490, NCDO 2375, NCIMB 702375, NCTC 12363
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