Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTP27312.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
OTP27311.1
Hypothetical protein.
 
    0.986
OTP27310.1
Hypothetical protein.
       0.866
DinG
Helicase.
 
    0.698
OTP27132.1
Hypothetical protein.
  
     0.676
OTP25506.1
Hypothetical protein.
  
     0.659
OTP27130.1
Hypothetical protein.
  
     0.647
OTP28379.1
Hypothetical protein.
  
     0.625
OTP25364.1
Hypothetical protein.
  
     0.560
OTP27024.1
Glycine betaine/carnitine/choline ABC transporter.
       0.555
OTP26297.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Enterococcus mundtii
NCBI taxonomy Id: 53346
Other names: ATCC 43186, CCUG 18656, CFBP 4251, CIP 103010, DSM 4838, E. mundtii, Enterobacter sp. PX-E.sp.Jor, JCM 8731, LMG 10748, LMG:10748, MUTK 559, NBRC 100490, NCDO 2375, NCIMB 702375, NCTC 12363
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