Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LicH | OTP25482.1 | A5802_001640 | A5802_002635 | 6-phospho-beta-glucosidase. | PTS system lactose/cellobiose-specific transporter subunit IIB. | 0.742 |
LicH | OTP25483.1 | A5802_001640 | A5802_002636 | 6-phospho-beta-glucosidase. | PTS system lactose/cellobiose-specific IIA component. | 0.758 |
LicH | OTP26672.1 | A5802_001640 | A5802_000388 | 6-phospho-beta-glucosidase. | PTS system lactose/cellobiose-specific transporter subunit IIB. | 0.745 |
LicH | OTP26673.1 | A5802_001640 | A5802_000389 | 6-phospho-beta-glucosidase. | PTS system lactose/cellobiose-specific IIA component. | 0.760 |
LicH | OTP27437.1 | A5802_001640 | A5802_001172 | 6-phospho-beta-glucosidase. | PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.821 |
LicH | OTP27438.1 | A5802_001640 | A5802_001173 | 6-phospho-beta-glucosidase. | PTS system cellobiose-specific IIB component. | 0.742 |
LicH | OTP27550.1 | A5802_001640 | A5802_001285 | 6-phospho-beta-glucosidase. | PTS system lactose/cellobiose-specific IIA component. | 0.459 |
LicH | OTP27813.1 | A5802_001640 | A5802_001549 | 6-phospho-beta-glucosidase. | Hypothetical protein. | 0.742 |
LicH | celC | A5802_001640 | A5802_003078 | 6-phospho-beta-glucosidase. | PTS system cellobiose-specific IIA componenent. | 0.779 |
OTP25482.1 | LicH | A5802_002635 | A5802_001640 | PTS system lactose/cellobiose-specific transporter subunit IIB. | 6-phospho-beta-glucosidase. | 0.742 |
OTP25482.1 | OTP25483.1 | A5802_002635 | A5802_002636 | PTS system lactose/cellobiose-specific transporter subunit IIB. | PTS system lactose/cellobiose-specific IIA component. | 0.995 |
OTP25482.1 | OTP26673.1 | A5802_002635 | A5802_000389 | PTS system lactose/cellobiose-specific transporter subunit IIB. | PTS system lactose/cellobiose-specific IIA component. | 0.986 |
OTP25482.1 | OTP27437.1 | A5802_002635 | A5802_001172 | PTS system lactose/cellobiose-specific transporter subunit IIB. | PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.829 |
OTP25482.1 | OTP27550.1 | A5802_002635 | A5802_001285 | PTS system lactose/cellobiose-specific transporter subunit IIB. | PTS system lactose/cellobiose-specific IIA component. | 0.926 |
OTP25482.1 | PtsH | A5802_002635 | A5802_000469 | PTS system lactose/cellobiose-specific transporter subunit IIB. | Phosphocarrier protein HPr. | 0.904 |
OTP25482.1 | celC | A5802_002635 | A5802_003078 | PTS system lactose/cellobiose-specific transporter subunit IIB. | PTS system cellobiose-specific IIA componenent. | 0.985 |
OTP25483.1 | LicH | A5802_002636 | A5802_001640 | PTS system lactose/cellobiose-specific IIA component. | 6-phospho-beta-glucosidase. | 0.758 |
OTP25483.1 | OTP25482.1 | A5802_002636 | A5802_002635 | PTS system lactose/cellobiose-specific IIA component. | PTS system lactose/cellobiose-specific transporter subunit IIB. | 0.995 |
OTP25483.1 | OTP26672.1 | A5802_002636 | A5802_000388 | PTS system lactose/cellobiose-specific IIA component. | PTS system lactose/cellobiose-specific transporter subunit IIB. | 0.986 |
OTP25483.1 | OTP26673.1 | A5802_002636 | A5802_000389 | PTS system lactose/cellobiose-specific IIA component. | PTS system lactose/cellobiose-specific IIA component. | 0.901 |
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