STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTP28003.1Lactoylglutathione lyase. (124 aa)    
Predicted Functional Partners:
OTP27109.1
Metallo-beta-lactamase.
  
 
 0.919
GloA
Glyoxalase.
     
  0.900
OTP25506.1
Hypothetical protein.
     
  0.900
SdhA
L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
  
 
  0.810
SdhB
L-serine dehydratase, iron-sulfur-dependent, beta subunit.
  
 
  0.806
dsdA
D-serine ammonia-lyase; Belongs to the serine/threonine dehydratase family. DsdA subfamily.
     
 0.800
NifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.710
OTP28014.1
Hypothetical protein.
 
     0.684
OTP27776.1
Nitroreductase.
  
  
 0.650
OTP28002.1
Hypothetical protein.
  
    0.617
Your Current Organism:
Enterococcus mundtii
NCBI taxonomy Id: 53346
Other names: ATCC 43186, CCUG 18656, CFBP 4251, CIP 103010, DSM 4838, E. mundtii, Enterobacter sp. PX-E.sp.Jor, JCM 8731, LMG 10748, LMG:10748, MUTK 559, NBRC 100490, NCDO 2375, NCIMB 702375, NCTC 12363
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