STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pbp2APenicillin-binding protein. (724 aa)    
Predicted Functional Partners:
OTP26792.1
Penicillin-binding protein transpeptidase.
 
 
 0.981
OTP26650.1
Penicillin-binding protein 2X.
 
 
0.960
OTP27204.1
Penicillin-binding protein 1A.
  
  
 
0.925
Pbp1B
Penicillin-binding protein.
  
  
0.924
OTP27880.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.920
OTP27050.1
Hypothetical protein.
     
 0.906
OTP24798.1
Hypothetical protein; Belongs to the UPF0342 family.
       0.838
RluD3
23S rRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.814
FtsW
Rod shape determining protein RodA; Belongs to the SEDS family.
 
 
 
 0.789
Pbp5
Penicillin-binding protein transpeptidase.
 
 
 0.781
Your Current Organism:
Enterococcus mundtii
NCBI taxonomy Id: 53346
Other names: ATCC 43186, CCUG 18656, CFBP 4251, CIP 103010, DSM 4838, E. mundtii, Enterobacter sp. PX-E.sp.Jor, JCM 8731, LMG 10748, LMG:10748, MUTK 559, NBRC 100490, NCDO 2375, NCIMB 702375, NCTC 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.