STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB39002.1Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (448 aa)    
Predicted Functional Partners:
SEB49578.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.984
SEB40422.1
Glutamine synthetase.
   
 
 0.941
SEB40320.1
Glycine dehydrogenase; Belongs to the GcvP family.
   
 0.920
SEB77298.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.916
SEB40590.1
Glutamine synthetase.
   
 
 0.912
SEB68247.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
   
 
 0.905
argJ
Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.904
SEB69371.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.903
SEB59206.1
Dihydrolipoamide dehydrogenase.
  
 
 0.902
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 
 0.900
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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