STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB50191.1PE-PPE domain-containing protein. (313 aa)    
Predicted Functional Partners:
SEB50232.1
S-formylglutathione hydrolase FrmB.
 
  
 0.958
SEB50151.1
Mycolic acid condensase.
 
   
 0.913
SEB50252.1
Diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase.
 
   
 0.904
SEB50269.1
Arabinofuranosyltransferase.
 
     0.885
SEB56245.1
Arabinosyltransferase C.
  
  0.864
SEB50173.1
Fatty acid CoA ligase FadD32.
 
   
 0.855
SEB65800.1
Type VII secretion protein EccB.
  
  0.853
SEB50212.1
Hypothetical protein.
     
 0.834
SEB77642.1
Protein of unknown function.
  
   
 0.791
SEB48378.1
Hypothetical protein.
  
  
  0.777
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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