STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB72886.1Iron (metal) dependent repressor, DtxR family. (226 aa)    
Predicted Functional Partners:
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.643
SEB38748.1
Signal peptidase I Serine peptidase. MEROPS family S26A; Belongs to the peptidase S26 family.
   
    0.595
SEB63188.1
Manganese transport system permease protein.
 
 
 0.529
nrdI-2
Protein involved in ribonucleotide reduction; Probably involved in ribonucleotide reductase function.
       0.499
SEB63225.1
Manganese transport system ATP-binding protein.
  
 
 0.491
SEB39910.1
Hypothetical protein.
   
    0.487
SEB53967.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.480
SEB72959.1
Ribonucleoside-diphosphate reductase class Ib alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.423
SEB76724.1
Antitoxin ParD1/3/4.
   
    0.422
SEB63674.1
Anchored repeat-type ABC transporter, ATP-binding subunit.
  
 
 0.411
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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