STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB80177.1Quinol monooxygenase YgiN. (107 aa)    
Predicted Functional Partners:
SEB80132.1
ABC transporter.
       0.824
SEB79997.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
       0.761
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.761
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.761
SEB79957.1
TatD DNase family protein.
       0.620
SEB80212.1
Mn2+ and Fe2+ transporters of the NRAMP family.
       0.570
SEB58851.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SEB80249.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
       0.523
SEB37901.1
TIGR03085 family protein.
  
     0.449
SEB79922.1
Protein of unknown function.
  
    0.426
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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