Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEB42050.1 | SEB82100.1 | SAMN04488531_0372 | SAMN04488531_1908 | XTP/dITP diphosphohydrolase. | DNA-binding transcriptional regulator, AcrR family; Manually curated. | 0.464 |
| SEB42050.1 | mfd | SAMN04488531_0372 | SAMN04488531_1909 | XTP/dITP diphosphohydrolase. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.472 |
| SEB68623.1 | SEB82100.1 | SAMN04488531_1535 | SAMN04488531_1908 | Fatty acid synthase, bacterial type. | DNA-binding transcriptional regulator, AcrR family; Manually curated. | 0.535 |
| SEB82017.1 | SEB82055.1 | SAMN04488531_1905 | SAMN04488531_1906 | Hypothetical protein. | Protein of unknown function. | 0.666 |
| SEB82017.1 | SEB82100.1 | SAMN04488531_1905 | SAMN04488531_1908 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family; Manually curated. | 0.422 |
| SEB82017.1 | mfd | SAMN04488531_1905 | SAMN04488531_1909 | Hypothetical protein. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.407 |
| SEB82055.1 | SEB82017.1 | SAMN04488531_1906 | SAMN04488531_1905 | Protein of unknown function. | Hypothetical protein. | 0.666 |
| SEB82055.1 | SEB82100.1 | SAMN04488531_1906 | SAMN04488531_1908 | Protein of unknown function. | DNA-binding transcriptional regulator, AcrR family; Manually curated. | 0.518 |
| SEB82055.1 | mfd | SAMN04488531_1906 | SAMN04488531_1909 | Protein of unknown function. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.518 |
| SEB82100.1 | SEB42050.1 | SAMN04488531_1908 | SAMN04488531_0372 | DNA-binding transcriptional regulator, AcrR family; Manually curated. | XTP/dITP diphosphohydrolase. | 0.464 |
| SEB82100.1 | SEB68623.1 | SAMN04488531_1908 | SAMN04488531_1535 | DNA-binding transcriptional regulator, AcrR family; Manually curated. | Fatty acid synthase, bacterial type. | 0.535 |
| SEB82100.1 | SEB82017.1 | SAMN04488531_1908 | SAMN04488531_1905 | DNA-binding transcriptional regulator, AcrR family; Manually curated. | Hypothetical protein. | 0.422 |
| SEB82100.1 | SEB82055.1 | SAMN04488531_1908 | SAMN04488531_1906 | DNA-binding transcriptional regulator, AcrR family; Manually curated. | Protein of unknown function. | 0.518 |
| SEB82100.1 | mfd | SAMN04488531_1908 | SAMN04488531_1909 | DNA-binding transcriptional regulator, AcrR family; Manually curated. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.869 |
| mfd | SEB42050.1 | SAMN04488531_1909 | SAMN04488531_0372 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | XTP/dITP diphosphohydrolase. | 0.472 |
| mfd | SEB82017.1 | SAMN04488531_1909 | SAMN04488531_1905 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Hypothetical protein. | 0.407 |
| mfd | SEB82055.1 | SAMN04488531_1909 | SAMN04488531_1906 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Protein of unknown function. | 0.518 |
| mfd | SEB82100.1 | SAMN04488531_1909 | SAMN04488531_1908 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | DNA-binding transcriptional regulator, AcrR family; Manually curated. | 0.869 |