STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB85515.1ABC-type transport system, substrate-binding protein. (540 aa)    
Predicted Functional Partners:
typA
GTP-binding protein.
  
    0.866
mshB
N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
 
     0.859
SEB85371.1
Hypothetical protein.
 
     0.856
SEB99283.1
Alpha-1,6-mannosyltransferase; Manually curated.
  
   
 0.850
SEB85589.1
Hypothetical protein.
       0.835
SEB85630.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.813
dapC
Succinyldiaminopimelate transaminase.
       0.813
SEB85707.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.813
SEB66256.1
Dienelactone hydrolase.
  
     0.760
SEB71400.1
Hypothetical protein.
  
     0.754
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.