STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB86044.1Hypothetical protein; Belongs to the LOG family. (261 aa)    
Predicted Functional Partners:
SEB51466.1
Hypothetical protein.
 
   
0.921
SEB86119.1
Glucosyl-3-phosphoglycerate synthase.
     
 0.888
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
     
 0.887
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
      
 0.885
SEB86008.1
Succinyldiaminopimelate desuccinylase.
     
 0.842
folP
Dihydropteroate synthase.
       0.835
SEB86166.1
Hypothetical protein.
       0.824
SEB86203.1
Protein of unknown function.
       0.805
SEB86242.1
23S rRNA m(1)G-748 methyltransferase.
       0.744
SEB85967.1
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase.
       0.619
Your Current Organism:
Corynebacterium coyleae
NCBI taxonomy Id: 53374
Other names: ATCC 700219, C. coyleae, CCUG 38194, CIP 104919, Corynebacterium coyleiae, DMMZ 214, DSM 44184, JCM 10381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.